Posted on August 8, 2013
- Nuclear genome in GFF3 format
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The nuclear genome sequences of Chaetomium thermophilum var. thermophilum DSM 1495 available in GFF3 format
download.
Posted on June 1, 2013
- Non protein-coding RNA
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Here we provide a list of putative non protein-coding RNAs (tRNAs, rRNAs, snoRNAs)
download.
- Nuclear genome
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The nuclear genome sequences of Chaetomium thermophilum var. thermophilum
DSM 1495 reported in our recent Cell paper
(Amlacher et al, 2011)
have been deposited at DDBJ/EMBL/GenBank under the accession number
ADUW00000000.
The version described in the paper is the first version, ADUW01000000.
- Mitochondrial genome
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The complete mitochondrial genome has been deposited at DDBJ/EMBL/GenBank
under the accession number
JN007486.
Posted on May 15, 2011
- Genome sequences
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8 chromosomes from the nuclear genome were sequenced at 24X coverage using
Roche 454 FLX and XLR technologies and assembled into 20 scaffolds with an
N50 length of 2.85Mbp.
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nuclear genome scaffolds,
ribosomal RNA operon,
complete mitochondrial genome
- Protein coding genes and annotations
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Protein coding genes from the nuclear genome were predicted using AUGUSTUS
gene prediction software. These were annotated using comparative analysis
of 12 fungal genomes using the eggNOG orthology pipeline.
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protein coding nuclear genes,
annotation in GenBank format
